| 9. References | |
|
[1] Shannon P. et al.: Cytoscape: A software environment for integrated models of biomolecular interaction networks. Genome Research 2003, 13, 2498-2504. [2] Mendes P. et al.: Pathdb: a second generation metabolic database. In Hofmeyr JH, Rohwer J, Snoep J. (eds.), Ani- mating the cellular map, pp. 207-212. Stellenbosch University Press. [3] Bader G. et al.: BIND-The Biomolecular Interaction Network Database. Nucleic Acid Res. 2001, 29, 242-245. [4] Bhalla US: The chemical organization of signaling interactions. Bioinformatics 2002, 18, 855-863. [5] Cary MP. et al.: Pathway information for system biology. FEBS Lett. 2005, 579(8), 1815-1820. [6] Chen L, Gupta A, Kurul ME: Efficient algorithms for pattern matching on directed acyclic graphs. In Proc. 21st Int. Conf. on Data Engineering (ICDE), Tokyo. [7] Hu Z, et al.: VisANT: data-integrating visual framework for biological networks and modules. Nucleic Acid Res. 2005, 33,352-357. [8] Krishnamurthy L. et al.: Pathways database system: an integrated system for biological pathways. Bioinformatics 2003, 19, 930-937. [9] Yeger-Lotem E. et al.: Network motifs in integrated cellular networks. Proc. Natl. Acad. Sci. 2004, 101 (16), 534-539. [10] Ogata H. et al.: KEGG: Kyoto encyclopedia of genes and genomes. Nucleic Acid Res. 1999, 27, 29-34. http://www.genome.ad.jp/kegg/.
[11] Nikitin A. et al.: Pathway studio - the analysis and navigation of molecular networks.
|